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Adapters

Adapters must be in FASTA format <adapters>.fasta and ordered in the expected order of adapters in the reads. There should be one entry per adapter (forward or reverse-complement orientation) with no overlapping adapter sequences. Duplicate names or sequences are not allowed.

Different Kinnex kits offer different concatenation factors. Choose the MAS/Kinnex adapter FASTA file accordingly. They can be downloaded here.

>A
AGCTTACTTGTGAAGA
>B
ACTTGTAAGCTGTCTA
>C
ACTCTGTCAGGTCCGA
>D
ACCTCCTCCTCCAGAA
>E
AACCGGACACACTTAG

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